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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
82
single cell RNA-seq
77
ATAC-seq
41
WGBS
22
snATAC-seq
Assay category
99
DNA accessibility
82
Transcription
41
DNA methylation
Date released
406
November, 2017
315
August, 2017
284
October, 2019
244
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
111
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
18
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
134
zippedFastqFolder
68
bigWig
66
bam
66
fastq
48
tsv
38
bed narrowPeak
1
bed bed3+
1
txt
Organism
222
Homo sapiens
Biosample type
182
primary cell
40
tissue
Organ
135
pancreas
113
epithelium
20
liver
2
connective tissue
2
musculature of body
Project
134
HPAP
88
AMP
Genome assembly (visualization)
87
hg19
48
GRCh38
Lab
134
Klaus Kaestner, Upenn
50
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
1
audit script error
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
222 results
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Clear Filters
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
7
22
25
pancreatic beta cell
9
13
16
pancreatic acinar cell
5
4
pancreatic delta cell
4
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tissue
liver
20
islet of Langerhans
18
skeletal muscle tissue
1
1
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