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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
64
single cell RNA-seq
49
total RNA-seq
13
DNase-seq
6
snATAC-seq
1
FAIRE-seq
1
Hi-C
1
RRBS
Assay category
113
Transcription
95
DNA accessibility
DNA binding
1
3D chromatin structure
1
DNA methylation
Date released
128
August, 2021
47
September, 2023
14
May, 2023
13
June, 2019
5
February, 2021
2
July, 2019
1
December, 2019
Available data
78
bed narrowPeak
64
xls
62
txt
14
bam
14
bigBed narrowPeak
14
bigWig
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
5
csv
5
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
hic
Organism
210
Homo sapiens
Biosample type
210
tissue
Organ
210
kidney
Project
163
AMP
47
KPMP
Genome assembly (visualization)
88
GRCh38
16
hg19
Lab
142
Katalin Susztak, Upenn
47
KPMP
21
AMP-T2D consortium
Audit category:
5
audit script error
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
210 results
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ATAC-seq
single cell RNA-seq
total RNA-seq
DNase-seq
snATAC-seq
FAIRE-seq
Hi-C
RRBS
tissue
kidney
75
64
49
13
6
1
1
1
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