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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
Assay category
65
DNA binding
44
DNA accessibility
4
Transcription
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
68
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
July, 2019
Available data
113
bam
92
bed narrowPeak
90
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
113
Homo sapiens
Biosample type
113
tissue
Organ
678
pancreas
674
liver
577
connective tissue
430
adipose tissue
312
epithelium
230
brain
190
heart
176
vasculature
171
blood vessel
137
kidney
113
limb
99
artery
66
bone element
60
blood
60
bodily fluid
52
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pituitary gland
Project
113
AMP
Genome assembly (visualization)
96
hg19
95
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
113 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
4
tibial artery
23
2
1
muscle of leg
7
13
muscle of arm
17
distal epiphysis of femur
1
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