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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
22
ATAC-seq
15
total RNA-seq
Assay category
30
DNA binding
22
DNA accessibility
15
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
551
February, 2021
334
November, 2017
303
May, 2021
266
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
144
bed narrowPeak
134
zippedFastqFolder
123
tsv
73
bam
67
bigWig
64
txt
64
xls
24
fastq
24
tagAlign
6
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
67
Homo sapiens
Biosample type
22
cell line
22
in vitro differentiated cells
20
tissue
3
primary cell
Organ
37
liver
8
embryo
3
epithelium
2
connective tissue
Project
67
AMP
Genome assembly (visualization)
66
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
tissue
liver
20
primary cell
hepatocyte
3
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