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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
DNase-seq
31
ChIP-seq
29
total RNA-seq
10
MeRIP-seq
1
ATAC-seq
Assay category
189
DNA accessibility
31
DNA binding
29
Transcription
Target of assay
19
histone
19
histone modification
13
control
11
narrow histone mark
8
broad histone mark
5
nucleotide modification
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
406
November, 2017
404
August, 2017
399
May, 2021
341
May, 2020
318
August, 2021
314
October, 2019
218
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
18
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
224
bam
215
bigWig
212
bed narrowPeak
211
bigBed narrowPeak
188
bed bed3+
188
bed broadPeak
188
bigBed broadPeak
29
tsv
Organism
259
Homo sapiens
Biosample type
192
tissue
61
primary cell
6
cell line
Organ
81
kidney
45
musculature of body
42
brain
38
heart
35
limb
26
connective tissue
26
epithelium
18
ureter
15
pancreas
10
vasculature
8
blood vessel
8
eye
4
artery
3
adipose tissue
3
liver
1
nerve
1
spinal cord
Project
259
AMP
Genome assembly (visualization)
216
GRCh38
193
hg19
Lab
249
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
33
inconsistent ontology term
BIOSAMPLE
ASSAY
259 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
MeRIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 49 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
osteoblast
1
4
1
cardiac muscle cell
1
3
+ See 18 more…
cell line
EndoC_BH1
6
See all biosamples
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