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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
Assay category
74
DNA binding
Target of assay
145
histone
145
histone modification
74
broad histone mark
71
narrow histone mark
52
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
28
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
October, 2019
Available data
69
bigWig
66
bam
64
bed narrowPeak
48
fastq
26
bigBed narrowPeak
6
bed bed3+
4
bed broadPeak
4
tagAlign
Organism
74
Homo sapiens
Biosample type
37
tissue
27
primary cell
10
cell line
Organ
74
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
37
heart
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
74
AMP
Genome assembly (visualization)
69
hg19
65
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
4
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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