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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
ChIP-seq
9
WGBS
6
RRBS
4
DNase-seq
2
ATAC-seq
Assay category
162
DNA binding
15
DNA methylation
6
DNA accessibility
Target of assay
133
histone modification
132
histone
77
broad histone mark
54
narrow histone mark
transcription factor
29
control
6
RNA binding protein
3
chromatin remodeller
Date released
678
February, 2021
341
May, 2020
323
May, 2021
303
August, 2021
289
October, 2019
210
June, 2019
183
August, 2017
162
November, 2017
149
February, 2023
113
May, 2019
102
July, 2019
96
May, 2022
74
April, 2019
52
December, 2017
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
May, 2024
24
February, 2020
18
April, 2020
18
October, 2017
18
October, 2018
17
November, 2018
16
January, 2019
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
7
December, 2018
6
November, 2019
6
November, 2020
2
June, 2018
1
August, 2018
1
March, 2023
1
September, 2018
Available data
79
fastq
74
bam
73
bigWig
70
bed narrowPeak
69
tagAlign
27
bed broadPeak
23
bigBed narrowPeak
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed bed3+
Organism
183
Homo sapiens
Biosample type
121
tissue
46
in vitro differentiated cells
16
primary cell
Organ
pancreas
91
connective tissue
50
liver
45
adipose tissue
29
epithelium
26
musculature of body
Project
183
AMP
Genome assembly (visualization)
77
hg19
58
GRCh38
Lab
183
AMP-T2D consortium
Audit category:
2
inconsistent assembly
2
inconsistent control read length
1
inconsistent control run_type
target.investigated_as!
transcription factor
organ_slims!
pancreas
BIOSAMPLE
ASSAY
183 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
ATAC-seq
tissue
liver
44
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
adipose tissue
2
3
right lobe of liver
1
1
+ See 1 more…
in vitro differentiated cells
adipocyte
45
1
primary cell
skeletal muscle myoblast
13
1
2
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