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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
21
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
41
DNA accessibility
21
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
21
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
62
bed narrowPeak
27
bam
27
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
66
Homo sapiens
Biosample type
66
tissue
64
cell line
2
primary cell
Organ
523
connective tissue
476
pancreas
464
adipose tissue
315
liver
293
kidney
257
heart
240
brain
158
bone element
117
blood vessel
117
vasculature
105
limb
78
musculature of body
66
artery
56
eye
32
nerve
20
lung
18
ureter
17
spleen
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
62
GRCh38
27
hg19
Lab
66
AMP-T2D consortium
target.investigated_as!
control
BIOSAMPLE
ASSAY
66 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
3
2
1
tibial artery
1
18
2
1
pulmonary artery
2
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