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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
47
Transcription
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
3
control
Date released
670
February, 2021
403
August, 2017
369
November, 2017
318
August, 2021
314
October, 2019
296
May, 2020
241
May, 2021
214
June, 2019
168
July, 2018
115
May, 2019
106
February, 2023
90
December, 2017
90
July, 2019
76
April, 2019
73
September, 2018
67
November, 2018
66
May, 2022
65
October, 2018
60
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
67
bigWig
64
bam
47
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
90
Homo sapiens
Biosample type
61
tissue
29
primary cell
Organ
24
heart
15
connective tissue
14
brain
13
epithelium
12
vasculature
11
blood vessel
10
kidney
9
adipose tissue
8
musculature of body
7
liver
5
limb
4
pancreas
3
artery
2
pericardium
1
eye
Project
90
AMP
Genome assembly (visualization)
73
hg19
61
GRCh38
Lab
90
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
RNA binding protein
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
+ See 25 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
Purkinje cell
1
+ See 20 more…
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