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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
42
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
63
transcription factor
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
551
February, 2021
303
May, 2021
299
November, 2017
264
August, 2017
260
May, 2020
207
October, 2019
206
June, 2019
164
July, 2018
92
May, 2019
72
September, 2018
68
December, 2017
67
July, 2019
62
April, 2019
59
November, 2018
49
April, 2018
46
August, 2021
36
October, 2018
35
May, 2024
31
February, 2018
30
November, 2019
28
December, 2018
20
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
67
fastq
66
bam
59
bigWig
52
bed narrowPeak
52
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
59
Homo sapiens
Biosample type
36
cell line
23
tissue
Organ
33
liver
10
blood
10
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
59
AMP
Genome assembly (visualization)
58
GRCh38
50
hg19
Lab
59
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
25
1
GM12878
10
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
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