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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
24
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
24
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
RNA binding protein
Date released
64
February, 2021
21
October, 2019
3
July, 2019
2
June, 2019
2
May, 2019
Available data
92
bam
84
bigWig
54
tsv
38
bed narrowPeak
24
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
92
Homo sapiens
Biosample type
64
cell line
26
tissue
2
primary cell
Organ
649
pancreas
579
connective tissue
570
liver
421
adipose tissue
303
epithelium
182
heart
161
brain
160
vasculature
155
blood vessel
127
kidney
96
limb
92
artery
73
musculature of body
70
bone element
45
blood
45
bodily fluid
33
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
92
AMP
Genome assembly (visualization)
127
GRCh38
92
hg19
Lab
92
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
92 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
18
1
2
coronary artery
2
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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