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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
WGBS
Assay category
19
DNA methylation
Date released
15
July, 2019
4
August, 2017
Available data
2754
bam
2588
bigWig
1475
tsv
1371
bed narrowPeak
889
fastq
655
bigBed narrowPeak
378
tagAlign
268
bed bed3+
258
bed broadPeak
221
bigBed broadPeak
160
txt
112
zippedFastqFolder
64
xls
21
bedpe bed3+
21
hic
19
bed bedMethyl
19
bigBed bedMethyl
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
19
Homo sapiens
Biosample type
10
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
Genome assembly (visualization)
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
RNA binding protein
biosample_type!
cell line
assay_title!
WGBS
BIOSAMPLE
ASSAY
19 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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