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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
total RNA-seq
Assay category
20
DNA binding
2
Transcription
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
4
control
3
transcription factor
RNA binding protein
1
chromatin remodeller
Date released
17
December, 2017
5
May, 2021
Available data
22
bam
18
bigWig
17
fastq
16
bed narrowPeak
12
bigBed narrowPeak
3
tagAlign
2
tsv
Organism
22
Homo sapiens
Biosample type
329
primary cell
59
cell line
22
in vitro differentiated cells
3
tissue
Organ
76
connective tissue
29
embryo
22
epithelium
13
liver
3
pancreas
1
adipose tissue
1
heart
Project
22
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
22
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
RNA binding protein
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
13
Hepatic endoderm
4
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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