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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
snATAC-seq
1
ATAC-seq
Assay category
50
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
13
November, 2018
12
January, 2019
1
January, 2018
Available data
50
bam
50
fastq
45
bigWig
44
bed narrowPeak
44
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
51
cell line
Organ
919
pancreas
731
liver
674
connective tissue
510
epithelium
486
adipose tissue
379
heart
344
kidney
283
brain
228
vasculature
223
blood vessel
159
bone element
140
artery
122
limb
93
musculature of body
60
eye
51
blood
51
bodily fluid
43
nerve
37
embryo
25
spleen
20
vein
18
ureter
16
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
51
AMP
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent control
target.investigated_as!
RNA binding protein
files.file_type!
hic
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
ATAC-seq
cell line
GM12878
50
1
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