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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
33
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
33
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
RNA binding protein
Date released
66
February, 2021
26
October, 2019
4
May, 2019
3
July, 2019
2
June, 2019
Available data
101
bam
84
bigWig
73
bed narrowPeak
58
tsv
24
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
101
Homo sapiens
Biosample type
66
cell line
33
tissue
2
primary cell
Organ
680
pancreas
624
liver
583
connective tissue
437
adipose tissue
309
epithelium
240
brain
205
heart
180
vasculature
176
blood vessel
141
kidney
114
limb
101
artery
66
bone element
57
musculature of body
50
blood
50
bodily fluid
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
101
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
101
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
101 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
23
1
2
coronary artery
4
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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