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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
3
ChIP-seq
Assay category
9
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
6
October, 2019
5
June, 2019
1
November, 2017
Available data
176
bam
146
bigWig
125
bed narrowPeak
75
bigBed narrowPeak
68
tsv
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
12
Homo sapiens
Biosample type
7
primary cell
5
tissue
Organ
78
kidney
59
liver
36
limb
35
brain
33
musculature of body
30
heart
20
epithelium
18
ureter
15
vasculature
12
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
12
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
12 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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