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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
970
histone modification
969
histone
490
narrow histone mark
478
broad histone mark
472
transcription factor
314
control
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
9
November, 2017
5
November, 2018
2
August, 2017
December, 2017
2
December, 2018
2
January, 2019
Available data
20
bam
20
bed narrowPeak
20
bigWig
20
fastq
18
bigBed narrowPeak
3
bed broadPeak
3
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
18
cell line
2
in vitro differentiated cells
Organ
13
liver
5
blood
5
bodily fluid
2
connective tissue
Project
20
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
8
inconsistent control read length
5
inconsistent control run_type
target.investigated_as!
RNA binding protein
month_released!
December, 2017
February, 2018
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
cell line
HepG2
13
GM12878
5
in vitro differentiated cells
adipocyte
2
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