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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
37
DNA binding
9
DNA accessibility
Target of assay
39
transcription factor
RNA binding protein
8
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
Available data
37
bam
37
fastq
35
bigWig
34
bed narrowPeak
34
bigBed narrowPeak
Organism
46
Homo sapiens
Biosample type
38
cell line
8
primary cell
Organ
930
pancreas
699
liver
673
connective tissue
516
epithelium
485
adipose tissue
351
kidney
347
heart
281
brain
231
vasculature
226
blood vessel
159
bone element
140
artery
122
limb
96
musculature of body
60
eye
46
blood
46
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
38
AMP
8
T1D
Genome assembly (visualization)
35
hg19
34
GRCh38
Lab
38
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
RNA binding protein
month_released!
November, 2018
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
37
1
primary cell
peripheral blood mononuclear cell
8
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