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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
47
ChIP-seq
Assay category
187
DNA accessibility
47
DNA binding
Target of assay
32
transcription factor
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
RNA binding protein
2
chromatin remodeller
Date released
278
November, 2017
206
June, 2019
189
October, 2019
135
August, 2017
133
May, 2021
105
August, 2021
92
May, 2019
68
December, 2017
65
February, 2023
62
April, 2019
52
November, 2018
46
September, 2018
38
May, 2022
36
November, 2019
35
May, 2024
34
October, 2018
28
December, 2018
27
May, 2020
23
February, 2021
16
February, 2018
15
January, 2019
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
246
bam
234
bed narrowPeak
234
bigBed narrowPeak
234
bigWig
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
33
fastq
Organism
234
Homo sapiens
Biosample type
166
tissue
43
primary cell
25
cell line
Organ
79
kidney
41
musculature of body
32
heart
32
limb
30
brain
25
blood
25
bodily fluid
18
ureter
16
epithelium
14
connective tissue
7
vasculature
5
blood vessel
5
eye
4
pancreas
3
spleen
2
artery
2
liver
1
adipose tissue
Project
234
AMP
Genome assembly (visualization)
234
GRCh38
211
hg19
Lab
234
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
1
inconsistent control
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
234 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 35 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
2
cardiac muscle cell
1
1
epithelial cell of proximal tubule
1
1
+ See 17 more…
cell line
GM12878
25
See all biosamples
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