Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
13
ATAC-seq
1
Hi-C
Assay category
53
DNA binding
13
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
13
control
12
histone
12
histone modification
10
broad histone mark
RNA binding protein
2
chromatin remodeller
2
narrow histone mark
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
61
fastq
58
bam
47
bigWig
45
bed narrowPeak
39
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
2
bed bed3+
Organism
67
Homo sapiens
Biosample type
36
tissue
26
cell line
5
primary cell
Organ
25
blood
25
bodily fluid
16
brain
16
pancreas
8
spleen
5
epithelium
1
adipose tissue
1
connective tissue
1
liver
Project
67
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
66
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
brain
15
spleen
7
1
islet of Langerhans
6
1
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 1 more…
cell line
GM12878
25
HepG2
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
See all biosamples
Download