Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
7
WGBS
5
total RNA-seq
4
single cell RNA-seq
2
RNA microarray
Assay category
49
DNA binding
DNA accessibility
9
Transcription
7
DNA methylation
Target of assay
64
transcription factor
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
666
February, 2021
392
August, 2017
369
November, 2017
360
May, 2021
281
October, 2019
241
May, 2020
236
August, 2021
168
July, 2018
115
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
90
December, 2017
76
April, 2019
65
October, 2018
60
March, 2020
59
September, 2018
57
November, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
34
November, 2019
33
December, 2018
27
June, 2019
25
February, 2020
24
January, 2019
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
61
bam
57
fastq
54
bigWig
42
bed narrowPeak
42
bigBed narrowPeak
9
tsv
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
67
Homo sapiens
Biosample type
40
cell line
19
tissue
6
primary cell
2
in vitro differentiated cells
Organ
36
liver
13
blood
13
bodily fluid
8
spleen
6
epithelium
4
pancreas
3
kidney
Project
67
AMP
Genome assembly (visualization)
54
GRCh38
45
hg19
Lab
67
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
total RNA-seq
single cell RNA-seq
RNA microarray
cell line
HepG2
26
1
GM12878
13
tissue
spleen
6
2
liver
4
body of pancreas
2
pancreas
2
kidney
1
+ See 2 more…
primary cell
hepatocyte
5
pancreatic cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
Download