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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
7
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
62
DNA binding
10
Transcription
Target of assay
29
control
29
histone
29
histone modification
19
broad histone mark
15
transcription factor
RNA binding protein
10
narrow histone mark
Date released
715
February, 2021
394
May, 2021
387
August, 2017
353
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
79
December, 2017
76
April, 2019
73
September, 2018
64
March, 2020
64
October, 2018
63
November, 2018
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
37
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
69
bam
48
fastq
40
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
11
tsv
Organism
74
Homo sapiens
Biosample type
65
tissue
7
primary cell
2
in vitro differentiated cells
Organ
46
pancreas
18
adipose tissue
18
connective tissue
8
epithelium
5
liver
3
kidney
Project
74
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
74
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
Audit category:
inconsistent control read length
target.investigated_as!
RNA binding protein
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
body of pancreas
27
endocrine pancreas
16
subcutaneous adipose tissue
10
omental fat pad
8
kidney
1
+ See 3 more…
primary cell
hepatocyte
5
pancreatic acinar cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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