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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
7
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
44
DNA binding
10
Transcription
Target of assay
30
histone
30
histone modification
29
control
broad histone mark
15
transcription factor
RNA binding protein
11
narrow histone mark
Date released
715
February, 2021
341
May, 2020
319
November, 2017
318
May, 2021
309
August, 2021
294
August, 2017
259
October, 2019
206
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
75
December, 2017
67
November, 2018
64
March, 2020
59
September, 2020
57
May, 2019
56
September, 2018
54
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
39
April, 2019
33
December, 2018
31
February, 2018
25
February, 2020
20
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
15
May, 2024
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
51
bam
38
fastq
22
bigWig
15
bed narrowPeak
15
bigBed narrowPeak
11
tsv
Organism
56
Homo sapiens
Biosample type
47
tissue
7
primary cell
2
in vitro differentiated cells
Organ
28
pancreas
18
adipose tissue
18
connective tissue
8
epithelium
5
liver
3
kidney
Project
56
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
56
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
RNA binding protein
broad histone mark
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
body of pancreas
17
subcutaneous adipose tissue
10
endocrine pancreas
8
omental fat pad
8
kidney
1
+ See 3 more…
primary cell
hepatocyte
5
pancreatic acinar cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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