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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ATAC-seq
20
total RNA-seq
18
ChIP-seq
2
Hi-C
Assay category
31
DNA accessibility
20
Transcription
18
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
8
control
6
broad histone mark
4
narrow histone mark
RNA binding protein
1
transcription factor
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
69
bam
41
bed narrowPeak
35
bigWig
20
tsv
11
fastq
5
bigBed narrowPeak
2
bed bed3+
2
bedpe bed3+
2
hic
Organism
71
Homo sapiens
Biosample type
46
tissue
15
cell line
5
in vitro differentiated cells
5
primary cell
Organ
65
pancreas
20
epithelium
1
adipose tissue
1
connective tissue
Project
71
AMP
Genome assembly (visualization)
65
hg19
63
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
6
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
12
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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