Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
8
ATAC-seq
Assay category
46
DNA binding
8
DNA accessibility
Target of assay
26
histone
26
histone modification
15
broad histone mark
11
control
11
narrow histone mark
9
transcription factor
Date released
712
February, 2021
394
May, 2021
349
August, 2017
307
October, 2019
284
August, 2021
212
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
115
May, 2019
98
July, 2019
88
November, 2017
76
April, 2019
73
September, 2018
65
October, 2018
61
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
November, 2018
32
December, 2018
31
December, 2017
24
February, 2020
23
October, 2017
19
April, 2020
19
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
48
fastq
46
bam
36
bigWig
34
bed narrowPeak
15
bed bed3+
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
Organism
54
Homo sapiens
Biosample type
28
in vitro differentiated cells
23
tissue
3
stem cell
Organ
liver
17
epithelium
16
brain
13
embryo
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
54
AMP
Genome assembly (visualization)
41
GRCh38
40
hg19
Lab
53
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
11
inconsistent control read length
target.investigated_as!
RNA binding protein
organ_slims!
liver
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
Hepatic endoderm
4
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
stem cell
hESC
3
See all biosamples
Download