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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
115
DNA binding
16
Transcription
3
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
23
control
RNA binding protein
5
transcription factor
Date released
697
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
314
October, 2019
214
June, 2019
212
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
115
May, 2019
105
July, 2019
90
December, 2017
76
April, 2019
72
September, 2018
66
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
115
bam
95
bigWig
92
bed narrowPeak
92
bigBed narrowPeak
19
fastq
Organism
134
Homo sapiens
Biosample type
111
tissue
23
primary cell
Organ
47
blood vessel
47
vasculature
28
brain
23
epithelium
21
pancreas
19
heart
7
limb
7
musculature of body
4
artery
4
kidney
Project
115
AMP
19
HPAP
Genome assembly (visualization)
94
GRCh38
92
hg19
Lab
115
AMP-T2D consortium
19
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
target.investigated_as!
RNA binding protein
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
134 results
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ChIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
15
temporal lobe
15
thoracic aorta
15
angular gyrus
13
aorta
13
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primary cell
pancreatic alpha cell
15
2
kidney epithelial cell
4
pancreatic beta cell
1
1
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