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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
981
histone modification
980
histone
498
narrow histone mark
481
broad histone mark
458
transcription factor
337
control
RNA binding protein
89
recombinant protein
26
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
9
November, 2017
4
November, 2018
2
August, 2017
2
December, 2017
Available data
17
bam
17
bed narrowPeak
17
bigWig
17
fastq
15
bigBed narrowPeak
3
bed broadPeak
3
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
13
cell line
2
in vitro differentiated cells
2
tissue
Organ
15
liver
5
blood
bodily fluid
2
connective tissue
Project
17
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
8
inconsistent control read length
5
inconsistent control run_type
target.investigated_as!
RNA binding protein
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
13
in vitro differentiated cells
adipocyte
2
tissue
liver
2
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