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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
65
Transcription
8
DNA methylation
6
DNA accessibility
Target of assay
3
control
Date released
524
February, 2021
249
November, 2017
242
August, 2017
203
May, 2020
203
May, 2021
189
October, 2019
186
June, 2019
158
July, 2018
105
August, 2021
90
May, 2019
79
July, 2019
72
September, 2018
71
December, 2017
61
April, 2019
58
November, 2018
49
April, 2018
38
November, 2019
36
October, 2018
35
February, 2023
35
May, 2024
31
February, 2018
28
December, 2018
20
January, 2019
14
October, 2017
12
May, 2023
11
March, 2020
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
September, 2020
2
June, 2018
2
March, 2019
1
March, 2023
Available data
79
bam
79
bigWig
65
tsv
8
bed bedMethyl
8
bigBed bedMethyl
5
bed narrowPeak
Organism
79
Homo sapiens
Biosample type
61
tissue
18
primary cell
Organ
21
heart
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
7
liver
6
kidney
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
79
AMP
Genome assembly (visualization)
89
hg19
79
GRCh38
Lab
79
AMP-T2D consortium
target.investigated_as!
RNA binding protein
organ_slims!
mammary gland
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
79 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
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primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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