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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
DNase-seq
1
WGBS
Assay category
29
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
48
transcription factor
RNA binding protein
15
recombinant protein
5
chromatin remodeller
Date released
189
November, 2017
162
May, 2020
46
December, 2017
33
November, 2018
19
August, 2017
7
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
August, 2021
2
June, 2019
1
February, 2021
1
March, 2020
Available data
33
bam
33
bigWig
33
fastq
32
bed narrowPeak
32
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
33
Homo sapiens
Biosample type
26
cell line
7
tissue
Organ
33
liver
10
blood
10
bodily fluid
6
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
33
AMP
Genome assembly (visualization)
33
GRCh38
30
hg19
Lab
33
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
DNase-seq
WGBS
cell line
HepG2
25
1
tissue
liver
4
2
right lobe of liver
1
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