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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
5
DNase-seq
1
WGBS
Assay category
30
DNA binding
5
DNA accessibility
1
DNA methylation
Target of assay
49
transcription factor
RNA binding protein
16
recombinant protein
5
chromatin remodeller
Date released
281
November, 2017
194
May, 2020
59
December, 2017
54
August, 2017
40
May, 2022
34
August, 2021
34
November, 2018
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
36
bam
35
bigWig
34
bed narrowPeak
34
bigBed narrowPeak
34
fastq
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
27
cell line
7
tissue
2
primary cell
Organ
80
kidney
43
musculature of body
36
liver
34
heart
32
brain
32
limb
18
connective tissue
18
epithelium
18
ureter
13
blood
13
bodily fluid
11
pancreas
9
spleen
7
vasculature
6
eye
5
blood vessel
2
adipose tissue
2
artery
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
32
hg19
Lab
36
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
26
1
tissue
liver
4
2
right lobe of liver
1
primary cell
hepatic stellate cell
1
hepatocyte
1
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