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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
3
DNase-seq
1
WGBS
Assay category
14
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
49
transcription factor
RNA binding protein
recombinant protein
5
chromatin remodeller
Date released
215
November, 2017
194
May, 2020
59
December, 2017
54
August, 2017
40
May, 2022
34
August, 2021
18
November, 2018
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
18
bam
18
bigWig
18
fastq
17
bed narrowPeak
17
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
11
cell line
7
tissue
Organ
18
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
17
hg19
Lab
18
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
RNA binding protein
recombinant protein
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
WGBS
cell line
HepG2
10
1
tissue
liver
4
2
right lobe of liver
1
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