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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
201
ChIP-seq
Assay category
201
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
recombinant protein
60
narrow histone mark
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
144
November, 2017
29
December, 2017
14
November, 2018
10
August, 2021
4
August, 2017
Available data
199
bigWig
195
bed narrowPeak
191
fastq
190
bam
181
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
2
bed bed3+
2
tar
Organism
201
Homo sapiens
Biosample type
164
cell line
37
tissue
Organ
201
liver
43
blood
43
bodily fluid
30
connective tissue
12
adipose tissue
10
pancreas
6
heart
6
spleen
4
artery
4
blood vessel
4
vasculature
3
embryo
1
epithelium
Project
201
AMP
Genome assembly (visualization)
199
hg19
157
GRCh38
Lab
191
AMP-T2D consortium
10
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
9
missing controlled_by
Audit category:
8
inconsistent control read length
5
inconsistent control run_type
target.investigated_as!
RNA binding protein
recombinant protein
BIOSAMPLE
ASSAY
201 results
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ChIP-seq
cell line
HepG2
164
tissue
liver
36
right lobe of liver
1
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