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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
10
snATAC-seq
9
single cell RNA-seq
4
total RNA-seq
2
pCHi-C
Assay category
22
DNA accessibility
13
Transcription
Date released
19
April, 2020
8
February, 2021
8
February, 2023
2
March, 2020
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
2
tsv
Organism
36
Homo sapiens
Biosample type
37
tissue
Organ
937
pancreas
733
liver
674
connective tissue
516
epithelium
486
adipose tissue
382
heart
351
kidney
283
brain
231
vasculature
226
blood vessel
159
bone element
140
artery
122
limb
96
musculature of body
60
eye
59
blood
59
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
LungMap
18
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
19
Xin Sun, UCSD
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
lung
10
9
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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