Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
19
ChIP-seq
10
ATAC-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
19
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
RNA binding protein
Date released
66
February, 2021
February, 2023
12
October, 2019
4
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
87
bam
70
bigWig
58
tsv
24
bed narrowPeak
10
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
91
Homo sapiens
Biosample type
66
cell line
23
tissue
2
primary cell
Organ
803
pancreas
691
liver
616
connective tissue
465
adipose tissue
420
epithelium
336
kidney
289
heart
212
brain
151
bone element
151
vasculature
146
blood vessel
91
artery
88
limb
76
musculature of body
59
blood
59
bodily fluid
33
embryo
29
eye
27
nerve
21
spleen
20
lung
18
ureter
13
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
91
AMP-T2D consortium
target.investigated_as!
RNA binding protein
broad histone mark
month_released!
February, 2023
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
1
9
1
2
coronary artery
1
4
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download