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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
32
ChIP-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
44
DNA accessibility
32
DNA binding
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
broad histone mark
17
control
15
narrow histone mark
Date released
35
October, 2019
32
June, 2019
6
February, 2021
5
July, 2019
3
May, 2019
Available data
76
bam
58
bed narrowPeak
53
bigWig
50
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
81
Homo sapiens
Biosample type
81
tissue
Organ
556
liver
389
pancreas
279
epithelium
214
kidney
192
brain
159
connective tissue
150
heart
124
vasculature
118
blood vessel
97
bone element
81
limb
70
adipose tissue
69
artery
69
blood
69
bodily fluid
67
musculature of body
42
eye
22
nerve
21
spleen
19
embryo
18
ureter
13
vein
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
81
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
broad histone mark
assay_slims!
Transcription
BIOSAMPLE
ASSAY
81 results
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DNase-seq
ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
2
19
1
muscle of arm
17
muscle of leg
13
3
1
tibial artery
2
9
1
gastrocnemius medialis
4
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