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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
52
histone
52
histone modification
34
transcription factor
28
narrow histone mark
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
34
August, 2017
15
September, 2018
10
November, 2017
2
November, 2018
1
October, 2017
Available data
62
bam
62
bigWig
62
fastq
29
bed narrowPeak
13
bed bed3+
13
bigBed narrowPeak
1
bed broadPeak
1
tagAlign
Organism
62
Homo sapiens
Biosample type
23
primary cell
22
tissue
12
cell line
5
in vitro differentiated cells
Organ
32
pancreas
17
connective tissue
12
adipose tissue
12
liver
11
epithelium
1
brain
Project
62
AMP
Genome assembly (visualization)
62
hg19
55
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
62
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
tissue
white adipose tissue
12
islet of Langerhans
9
brain
1
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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