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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
single cell RNA-seq
Assay category
4
3D chromatin structure
2
Transcription
Date released
3
October, 2022
2
December, 2019
1
October, 2019
Available data
fastq
4
hic
3
bedpe bed3+
3
cool
2
tsv
Organism
6
Homo sapiens
Biosample type
tissue
4
primary cell
2
in vitro differentiated cells
Organ
4
epithelium
3
pancreas
1
blood vessel
1
vasculature
1
vein
Project
3
AMP
3
HPAP
Genome assembly (visualization)
4
hg19
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
237
inconsistent ontology term
6
audit script error
1
inconsistent replicate
target.investigated_as!
broad histone mark
biosample_type!
tissue
files.file_type!
fastq
BIOSAMPLE
ASSAY
6 results
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Hi-C
single cell RNA-seq
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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