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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
15
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
15
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
broad histone mark
15
narrow histone mark
Date released
316
November, 2017
283
May, 2021
170
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
91
August, 2017
81
August, 2021
62
November, 2018
59
September, 2020
56
October, 2019
56
September, 2018
48
July, 2018
47
June, 2019
43
April, 2018
34
December, 2017
31
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
15
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
3
May, 2019
2
October, 2018
Available data
56
fastq
55
bam
55
bigWig
29
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
56
Homo sapiens
Biosample type
56
primary cell
Organ
55
pancreas
51
epithelium
Project
56
AMP
Genome assembly (visualization)
55
GRCh38
55
hg19
Lab
56
AMP-T2D consortium
Audit category:
15
missing controlled_by
target.investigated_as!
broad histone mark
biosample_type!
tissue
BIOSAMPLE
ASSAY
56 results
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total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
7
4
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
4
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