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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
6
DNA binding
2
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
8
histone
8
histone modification
broad histone mark
4
narrow histone mark
2
control
Date released
7
June, 2019
3
July, 2019
Available data
9
bam
7
bigWig
5
bed narrowPeak
5
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
tissue
10
primary cell
Organ
465
epithelium
413
liver
404
pancreas
113
connective tissue
94
vasculature
88
blood vessel
80
heart
69
blood
69
bodily fluid
68
artery
50
kidney
33
embryo
21
brain
13
vein
10
musculature of body
5
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
10
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
target.investigated_as!
broad histone mark
biosample_type!
tissue
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
4
1
1
skeletal muscle cell
2
1
1
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