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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
268
ChIP-seq
Assay category
268
DNA binding
Target of assay
236
transcription factor
74
histone
74
histone modification
66
recombinant protein
broad histone mark
35
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
268
November, 2017
202
June, 2019
139
October, 2019
98
August, 2021
86
August, 2017
73
November, 2018
69
May, 2021
65
February, 2023
57
December, 2017
39
May, 2019
38
May, 2022
31
November, 2019
30
December, 2018
29
September, 2018
28
April, 2019
27
May, 2020
26
October, 2018
23
February, 2021
17
January, 2019
8
February, 2018
7
July, 2019
7
October, 2017
5
September, 2017
3
March, 2020
2
November, 2020
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
268
Homo sapiens
Biosample type
242
cell line
20
tissue
6
primary cell
Organ
242
liver
26
brain
4
epithelium
4
vasculature
2
blood vessel
Project
268
AMP
Genome assembly (visualization)
250
hg19
235
GRCh38
Lab
268
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
14
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
268 results
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Clear Filters
ChIP-seq
cell line
HepG2
242
tissue
layer of hippocampus
6
caudate nucleus
4
middle frontal area 46
4
substantia nigra
3
cingulate gyrus
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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