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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
47
transcription factor
17
histone
17
histone modification
9
narrow histone mark
broad histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
56
November, 2017
9
August, 2017
9
November, 2018
7
October, 2019
1
November, 2020
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
56
Homo sapiens
Biosample type
50
cell line
6
primary cell
Organ
50
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
Project
56
AMP
Genome assembly (visualization)
56
hg19
43
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
7
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
cell line
HepG2
50
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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