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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
42
DNA binding
9
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
control
Date released
27
December, 2018
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
42
bam
42
fastq
40
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
43
cell line
8
primary cell
Organ
868
pancreas
704
liver
640
connective tissue
480
epithelium
471
adipose tissue
339
kidney
316
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
61
eye
51
blood
51
bodily fluid
33
embryo
27
nerve
20
lung
18
spleen
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
8
T1D
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
43
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
broad histone mark
lab.title!
Karen Mohlke, UNC
month_released!
January, 2019
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
42
1
primary cell
peripheral blood mononuclear cell
8
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