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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
53
ChIP-seq
5
ATAC-seq
Assay category
98
Transcription
53
DNA binding
5
DNA accessibility
Target of assay
114
histone
114
histone modification
broad histone mark
50
narrow histone mark
3
control
Date released
111
May, 2021
45
May, 2020
Available data
160
bam
156
bigWig
96
tsv
68
bed narrowPeak
40
tagAlign
24
fastq
6
txt
2
bed bed3+
Organism
156
Homo sapiens
Biosample type
151
primary cell
5
in vitro differentiated cells
Project
136
T1D
20
AMP
Genome assembly (visualization)
156
hg19
136
GRCh38
Lab
2517
AMP-T2D consortium
156
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
13
Bing Ren, UCSD
10
Klaus Kaestner, Upenn
5
Struan F.A. Grant, CHOP
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
156 results
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total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
40
CD8-positive, alpha-beta T cell
4
13
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
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in vitro differentiated cells
embryonic stem cell
5
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