Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
single cell RNA-seq
77
ATAC-seq
41
WGBS
26
total RNA-seq
22
snATAC-seq
Assay category
109
Transcription
99
DNA accessibility
41
DNA methylation
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
73
bam
69
bigWig
68
fastq
49
tsv
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
249
Homo sapiens
Biosample type
177
primary cell
72
tissue
Organ
143
pancreas
113
epithelium
40
liver
2
connective tissue
2
musculature of body
Project
134
HPAP
115
AMP
Genome assembly (visualization)
88
hg19
49
GRCh38
Lab
134
Klaus Kaestner, Upenn
51
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
249 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
WGBS
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
3
22
25
pancreatic beta cell
3
13
16
pancreatic acinar cell
6
4
pancreatic delta cell
7
+ See 6 more…
tissue
liver
20
20
islet of Langerhans
6
18
6
skeletal muscle tissue
1
1
See all biosamples
Download