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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
43
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
60
histone
60
histone modification
broad histone mark
23
narrow histone mark
19
control
6
transcription factor
5
nucleotide modification
4
RNA binding protein
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
48
bam
33
bigWig
30
bed narrowPeak
28
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
59
Homo sapiens
Biosample type
47
tissue
6
cell line
6
primary cell
Organ
30
heart
13
kidney
10
pancreas
6
connective tissue
6
epithelium
Project
59
AMP
Genome assembly (visualization)
34
hg19
33
GRCh38
Lab
49
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
20
kidney
13
heart right ventricle
6
heart
4
islet of Langerhans
4
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
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