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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
141
ChIP-seq
Assay category
141
DNA binding
Target of assay
123
histone
123
histone modification
broad histone mark
50
narrow histone mark
47
transcription factor
44
control
9
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
141
bam
96
bed narrowPeak
96
bigWig
79
bigBed narrowPeak
79
fastq
10
bed bed3+
Organism
141
Homo sapiens
Biosample type
104
tissue
32
in vitro differentiated cells
3
primary cell
2
stem cell
Organ
53
liver
28
blood vessel
28
vasculature
15
epithelium
14
heart
13
brain
12
embryo
5
artery
3
kidney
3
limb
3
musculature of body
2
pancreas
Project
141
AMP
Genome assembly (visualization)
101
hg19
100
GRCh38
Lab
141
AMP-T2D consortium
Audit category:
27
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
141 results
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Clear Filters
ChIP-seq
tissue
liver
38
thoracic aorta
9
ascending aorta
8
right lobe of liver
7
temporal lobe
7
+ See 8 more…
in vitro differentiated cells
hepatocyte
8
pancreatic endoderm
8
Hepatic endoderm
4
Posterior foregut
4
definitive endodermal cell
4
+ See 1 more…
primary cell
kidney epithelial cell
3
stem cell
hESC
2
See all biosamples
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