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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
21
ATAC-seq
8
ChIP-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
21
DNA accessibility
8
DNA binding
1
Transcription
Target of assay
5
transcription factor
3
control
Date released
347
November, 2017
223
October, 2019
184
August, 2021
170
August, 2017
163
June, 2019
115
February, 2021
113
February, 2023
87
November, 2018
79
December, 2017
66
May, 2022
62
May, 2021
59
May, 2019
55
October, 2018
50
May, 2020
47
September, 2023
43
April, 2019
35
December, 2018
35
November, 2019
30
July, 2019
21
January, 2019
20
May, 2024
19
April, 2020
18
March, 2020
16
February, 2018
15
May, 2023
13
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
September, 2017
5
March, 2019
4
July, 2018
4
March, 2023
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
569
bam
tsv
549
bigWig
89
txt
22
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
1
bed bed3
1
bed bed3+
Organism
115
Homo sapiens
Biosample type
93
tissue
primary cell
18
cell line
4
in vitro differentiated cells
Organ
92
bone element
14
artery
14
blood vessel
14
heart
14
vasculature
8
skeleton
6
limb
4
connective tissue
3
liver
Project
115
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
1
inconsistent replicate
target.investigated_as!
broad histone mark
files.file_type!
tsv
biosample_type!
primary cell
BIOSAMPLE
ASSAY
115 results
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RNA microarray
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
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