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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
total RNA-seq
50
ChIP-seq
2
pCHi-C
1
Hi-C
Assay category
144
Transcription
50
DNA binding
1
3D chromatin structure
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
307
November, 2017
194
May, 2020
53
December, 2017
53
November, 2018
40
May, 2022
35
August, 2017
33
August, 2021
10
July, 2019
5
December, 2019
5
January, 2019
4
October, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
194
bam
171
bigWig
146
tsv
50
tagAlign
27
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
197
Homo sapiens
Biosample type
196
tissue
1
cell line
Organ
197
liver
14
pancreas
7
heart
6
epithelium
5
musculature of body
4
blood vessel
4
vasculature
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
197
AMP
Genome assembly (visualization)
172
hg19
163
GRCh38
Lab
197
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
197 results
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total RNA-seq
ChIP-seq
pCHi-C
Hi-C
tissue
liver
144
50
1
1
cell line
HepG2
1
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