Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
418
ChIP-seq
Assay category
418
DNA binding
Target of assay
249
transcription factor
180
histone
180
histone modification
broad histone mark
94
control
72
narrow histone mark
66
recombinant protein
42
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
408
bam
328
bigWig
316
fastq
307
bed narrowPeak
306
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
418
Homo sapiens
Biosample type
307
cell line
99
tissue
12
primary cell
Organ
307
liver
62
brain
34
vasculature
31
blood vessel
14
heart
9
epithelium
5
artery
3
kidney
3
limb
3
musculature of body
2
pancreas
Project
418
AMP
Genome assembly (visualization)
310
hg19
273
GRCh38
Lab
418
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
418 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
307
tissue
layer of hippocampus
10
thoracic aorta
9
ascending aorta
8
caudate nucleus
7
cingulate gyrus
7
+ See 12 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
kidney epithelial cell
3
See all biosamples
Download