Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
DNase-seq
6
WGBS
5
GRO-seq
3
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
21
DNA binding
10
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
15
transcription factor
6
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
323
May, 2021
277
August, 2021
267
August, 2017
255
October, 2019
208
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
98
July, 2019
62
May, 2019
61
March, 2020
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
49
November, 2017
47
September, 2023
43
April, 2019
35
November, 2018
34
December, 2018
31
February, 2018
26
December, 2017
24
February, 2020
21
January, 2019
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
40
fastq
36
bigWig
34
bam
22
bed narrowPeak
22
bigBed narrowPeak
6
bed bed3+
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
1
csv
Organism
43
Homo sapiens
Biosample type
21
tissue
16
cell line
4
in vitro differentiated cells
1
primary cell
1
stem cell
Organ
liver
16
blood
16
bodily fluid
9
spleen
7
pancreas
2
adipose tissue
2
brain
2
connective tissue
1
embryo
1
musculature of body
Project
43
AMP
Genome assembly (visualization)
27
GRCh38
25
hg19
5
hg18
Lab
43
AMP-T2D consortium
target.investigated_as!
broad histone mark
organ_slims!
liver
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
GRO-seq
ATAC-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
adipose tissue
1
+ See 2 more…
cell line
GM12878
15
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
pancreatic cell
1
stem cell
hESC
1
See all biosamples
Download